Whole genome sequencing data of Escherichia coli isolated from bloodstream infection patients in Cipto Mangunkusumo National Hospital, Jakarta, Indonesia

Erni Juwita Nelwan, Nelly Puspandari, Rafika Indah Paramita, Linda Erlina, Editha Renesteen, Fadilah Fadilah

Research output: Contribution to journalArticlepeer-review

2 Citations (Scopus)

Abstract

Bloodstream infections (BSIs) are some of the most devastating preventable complications in critical care units. Of the bacterial causes of BSIs, Escherichia coli is the most common among Enterobacteriaceae. Bacteria resistant to therapeutic antibiotics represent a significant global health challenge. In this study, we present whole genome sequence data of 22 E. coli isolates that were obtained from bloodstream infection patients admitted to Cipto Mangunkusumo National Hospital, Jakarta, Indonesia. These data will be useful for analysing the serotypes, virulence genes, and antimicrobial resistance genes of E. coli. DNA sequences of E. coli were obtained using the Illumina MiSeq platform. The FASTQ raw files of these sequences are available under BioProject accession number PRJNA596854 and Sequence Read Archive accession numbers SRR10761126–SRR10761147.

Original languageEnglish
Article number105631
JournalData in Brief
Volume30
DOIs
Publication statusPublished - Jun 2020

Keywords

  • Bloodstream infection
  • Cipto Mangunkusumo National Hospital
  • E. coli
  • Indonesia
  • Jakarta
  • Whole genome sequencing

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