TY - JOUR
T1 - Role of immunoinformatics in accelerating epitope-based vaccine development against dengue virus
AU - Alkaff, Ahmad Husein
AU - Saragih, Mutiara
AU - Fardiansyah, Mochammad Arfin
AU - Tambunan, Usman Sumo Friend
N1 - Publisher Copyright:
© 2020 Alkaff et al.
PY - 2020/1/1
Y1 - 2020/1/1
N2 - Dengue Fever (DF) has emerged as a significant public health problem of international concern with its high prevalence in the tropic and subtropical regions. Dengue Virus (DENV), which is the cause of DF, consists of four serotypes of antigenically distinct viruses. The immense variation and limited identity similarity at the amino acid level lead to a problematic challenge in the development of an efficacious vaccine. Fortunately, the extensively available immunological data, the advance in antigenic peptide prediction, and the incorporation of molecular docking and dynamics simulation in immunoinformatics have directed the vaccine development towards the rational design of the epitope-based vaccine. Here, we point out the current state of dengue epidemiology and the recent development in vaccine development. Subsequently, we provide a systematic review of our validated method and tools for B-and T-cell epitope prediction as well as the use of molecular docking and dynamics in evaluating epitope affinity and stability in the discovery of a new tetravalent dengue vaccine through computational epitope-based vaccine design.
AB - Dengue Fever (DF) has emerged as a significant public health problem of international concern with its high prevalence in the tropic and subtropical regions. Dengue Virus (DENV), which is the cause of DF, consists of four serotypes of antigenically distinct viruses. The immense variation and limited identity similarity at the amino acid level lead to a problematic challenge in the development of an efficacious vaccine. Fortunately, the extensively available immunological data, the advance in antigenic peptide prediction, and the incorporation of molecular docking and dynamics simulation in immunoinformatics have directed the vaccine development towards the rational design of the epitope-based vaccine. Here, we point out the current state of dengue epidemiology and the recent development in vaccine development. Subsequently, we provide a systematic review of our validated method and tools for B-and T-cell epitope prediction as well as the use of molecular docking and dynamics in evaluating epitope affinity and stability in the discovery of a new tetravalent dengue vaccine through computational epitope-based vaccine design.
KW - Antigen discovery
KW - Dengue virus
KW - Epitope-based vaccine
KW - Immunoinformatics
KW - In-silico vaccine design
KW - Molecular docking simulation
KW - Molecular dynamics simulation
UR - http://www.scopus.com/inward/record.url?scp=85084048611&partnerID=8YFLogxK
U2 - 10.2174/1874091X02014010009
DO - 10.2174/1874091X02014010009
M3 - Article
AN - SCOPUS:85084048611
SN - 1874-091X
VL - 14
SP - 9
EP - 18
JO - Open Biochemistry Journal
JF - Open Biochemistry Journal
IS - 1
ER -