TY - GEN
T1 - Molecular phylogenetic analyses of filamentous fungi from deteriorated old Chinese manuscripts in Central Library Universitas Indonesia
AU - Rachmania, M. K.
AU - Oetari, A.
AU - Rahmadewi, M.
AU - Sjamsuridzal, W.
N1 - Funding Information:
This research was supported by Universitas Indonesia PITTA Grant 2015 and 2017 with contract number 1715/UN2.R12/HKP.05.00/2015 and 627/UN2.R3.1/HKP.05.00/2017.
Publisher Copyright:
© 2018 Author(s).
PY - 2018/10/22
Y1 - 2018/10/22
N2 - Phylogenetic analyses can be used in order to obtain the evolutionary relationship and evolutionary distances among the species of fungi. Molecular phylogenetic analyses of ITS regions (ITS1; 5.8S rDNA; ITS2) of ribosomal DNA of filamentous fungi from four deteriorated old Chinese manuscripts in Central Library Universitas Indonesia was conducted to obtain information of the phylogenetic relationships among the species, closely related species, species diversity, and taxonomic position. Phylogenetic tree construction from the ITS regions was performed using methods of Neighbor-Joining, Maximum Likelihood, and Minimum Evolution with Kimura's two-parameter model, and bootstrap 1,000 replicates. Eleven fungal strains belonged to three classes (Dothideomycetes, Eurotiomycetes and Sordariomycetes), five orders (Capnodiales, Eurotiales, Hypocreales, Pleosporales, and Xylariales), six families (Aspergillaceae, Cladosporiaceae, Microdochiaceae, Ophiocordycipitaceae, Pleosporaceae, and Trichocomaceae), six genera (Aspergillus, Cladosporium, Curvularia, Penicillium, Purpureocillium, and Sarocladium), and three closely related species (Aspergillus pseudodeflectus, Penicillium coffeae, and Purpureocillium lilacinum syn. Paecilomyces lilacinus). The ITS sequences of other strains were not identical to any type strains. Further studies using multiple locus analyses are required to confirm the species identities of these strains.
AB - Phylogenetic analyses can be used in order to obtain the evolutionary relationship and evolutionary distances among the species of fungi. Molecular phylogenetic analyses of ITS regions (ITS1; 5.8S rDNA; ITS2) of ribosomal DNA of filamentous fungi from four deteriorated old Chinese manuscripts in Central Library Universitas Indonesia was conducted to obtain information of the phylogenetic relationships among the species, closely related species, species diversity, and taxonomic position. Phylogenetic tree construction from the ITS regions was performed using methods of Neighbor-Joining, Maximum Likelihood, and Minimum Evolution with Kimura's two-parameter model, and bootstrap 1,000 replicates. Eleven fungal strains belonged to three classes (Dothideomycetes, Eurotiomycetes and Sordariomycetes), five orders (Capnodiales, Eurotiales, Hypocreales, Pleosporales, and Xylariales), six families (Aspergillaceae, Cladosporiaceae, Microdochiaceae, Ophiocordycipitaceae, Pleosporaceae, and Trichocomaceae), six genera (Aspergillus, Cladosporium, Curvularia, Penicillium, Purpureocillium, and Sarocladium), and three closely related species (Aspergillus pseudodeflectus, Penicillium coffeae, and Purpureocillium lilacinum syn. Paecilomyces lilacinus). The ITS sequences of other strains were not identical to any type strains. Further studies using multiple locus analyses are required to confirm the species identities of these strains.
UR - http://www.scopus.com/inward/record.url?scp=85056132156&partnerID=8YFLogxK
U2 - 10.1063/1.5064121
DO - 10.1063/1.5064121
M3 - Conference contribution
AN - SCOPUS:85056132156
T3 - AIP Conference Proceedings
BT - Proceedings of the 3rd International Symposium on Current Progress in Mathematics and Sciences 2017, ISCPMS 2017
A2 - Yuniati, Ratna
A2 - Mart, Terry
A2 - Anggraningrum, Ivandini T.
A2 - Triyono, Djoko
A2 - Sugeng, Kiki A.
PB - American Institute of Physics Inc.
T2 - 3rd International Symposium on Current Progress in Mathematics and Sciences 2017, ISCPMS 2017
Y2 - 26 July 2017 through 27 July 2017
ER -